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Bovine Serum Albumin Tip5P at neutral pH 2/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (Tip5P) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
SARS-CoV-2 fusion protein neutral pH 2/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion). -
SARS-CoV-2 fusion protein low pH 2/3
A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
Bovine Serum Albumin spc/E at neutral pH 2/3
A simulation of Bovine Serum Albumin [pdbid 3V03] in water (spc/E) with amino acid protonation as to mimic pH 7 at room temperature without counterions. -
Hendra virus fusion protein neutral pH 2/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 7 physiological conditions. -
Hendra virus fusion protein low pH 2/3
A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome. -
Beta peptide 3
Beta peptide 3 with GROMOS 54A7 in GROMOS (replicate 2 of 3). -
Beta peptide 2
Beta peptide 2 with GROMOS 54A7 in GROMOS (replicate 2 of 3). -
Beta peptide 1
Beta peptide 1 with GROMOS 54A7 in GROMOS (replicate 2 of 3). -
Beta peptide 3
Beta peptide 3 with GROMOS 53A6 in GROMOS (replicate 2 of 3). -
Beta peptide 2
Beta peptide 2 with GROMOS 53A6 in GROMOS (replicate 2 of 3). -
Beta peptide 1
Beta peptide 1 with GROMOS 53A6 in GROMOS (replicate 2 of 3). -
Beta peptide 3
Beta peptide 3 with GROMOS 45A4 in GROMOS (replicate 2 of 3). -
Beta peptide 2
Beta peptide 2 with GROMOS 45A4 in GROMOS (replicate 2 of 3). -
Beta peptide 1
Beta peptide 1 with GROMOS 45A4 in GROMOS (replicate 2 of 3). -
Beta peptide 3
Beta peptide 3 with GROMOS 54A8 in GROMOS (replicate 2 of 3). -
Beta peptide 2
Beta peptide 2 with GROMOS 54A8 in GROMOS (replicate 2 of 3). -
Beta peptide 1
Beta peptide 1 with GROMOS 54A8 in GROMOS (replicate 2 of 3).
