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mduq

Molecular Dynamics Group UQ

The group focuses on understanding and predicting the macroscopic (experimentally observable) properties of biomolecular systems such as proteins, nucleic acids and lipid...

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1
Datasets
1

Organizacións

  • Molecular Dynamics ... - 1

Grupos

  • Antimicrobial peptides - 1

Etiquetas

  • 54A7 - 1
  • antimicrobial peptides - 1
  • barostat is Berendsen - 1
  • GROMACS - 1
  • lipid bilayer - 1
  • lipid-popc - 1
  • pediocin PA-1 - 1
  • replicate-1 of 3 - 1
  • Simulation time at ... - 1
  • solvent-H2O - 1

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Formatos

  • edr - 1
  • gro - 1
  • itp - 1
  • log - 1
  • md1.xtc - 1
  • mdp - 1
  • ndx - 1
  • top - 1
  • tpr - 1

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1 dataset found

Grupos: Antimicrobial peptides Formatos: md1.xtc

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  • 1x pediocin PA-1 with a POPC lipid bilayer at pH 5 1/3

    Pediocin PA-1 antimicrobial peptide with 512-POPC lipid bilayer in water, 100 mM NaCl, low-pH protonation state (LYSH and HISH), simulated for 400 ns, initial 150 ns contained...
    • mdp
    • itp
    • md1.xtc
    • log
    • edr
    • ndx
    • top
    • tpr
    • gro
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