231 datasets found

A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome and F1/F2 cleavage.

A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome and F1/F2 cleavage.

A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome and F1/F2 cleavage.

A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion).

A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion).

A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with amino acid protonation as to mimic pH 7 (pre-fusion).

A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome.

A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome.

A simulation of the SARS-CoV-2 fusion protein [pdbid 6vsb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome.

Hen egg-white lysozyme protein with GROMOS 54A7 in AMBER (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1AKI, URL:...

Insulin protein with GROMOS DIMER in AMBER (replicate 3 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 5ENA, URL: https://www.rcsb.org/structure/5ENA

Insulin protein with GROMOS DIMER in AMBER (replicate 2 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 5ENA, URL: https://www.rcsb.org/structure/5ENA

Insulin protein with GROMOS DIMER in AMBER (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 5ENA, URL: https://www.rcsb.org/structure/5ENA

Insulin protein with GROMOS 54A7 in AMBER (replicate 3 of 3). Note that although this protein occurs as a dimer, only one unit was simulated. Initial structure obtained from the...

Insulin protein with GROMOS 54A7 in AMBER (replicate 2 of 3). Note that although this protein occurs as a dimer, only one unit was simulated. Initial structure obtained from the...

Insulin protein with GROMOS 54A7 in AMBER (replicate 1 of 3). Note that although this protein occurs as a dimer, only one unit was simulated. Initial structure obtained from the...

Protein Sis1 with GROMOS 54A7 in AMBER (replicate 3 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 4RWU, URL: https://www.rcsb.org/structure/4RWU

Protein Sis1 with GROMOS 54A7 in AMBER (replicate 2 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 4RWU, URL: https://www.rcsb.org/structure/4RWU

Protein Sis1 with GROMOS 54A7 in AMBER (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 4RWU, URL: https://www.rcsb.org/structure/4RWU

Putative Glutaminyl cyclase protein with GROMOS 54A7 in AMBER (replicate 3 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 4MHP, URL:...