1,343 datasets found

A simulation of the Hendra virus fusion protein [pdbid 5ejb] in water with complete amino acid protonation as to mimic pH 3 in the late endosome/ lysosome.

A lipid bilayer consisting of 512 D6PC molecules. Initiated from a smaller 128-lipid DLPC equilibrated bilayer with trimmed tails. Pore spontaneously form during the simulation.

Hen egg-white lysozyme protein with GROMOS 54A7 in GROMOS (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1AKI, URL:...

Hen egg-white lysozyme protein with GROMOS 54A7 in AMBER (replicate 1 of 3). Initial structure obtained from the Protein Data Bank (PDB). PDB ID: 1AKI, URL:...

Alpha-helical peptide YGG with GROMOS 54A7 in GROMOS (replicate 2 of 2).

Alpha-helical peptide YGG with GROMOS 54A7 in GROMOS (replicate 1 of 2).

Alpha-helical peptide YGG with GROMOS 54A7 in GROMOS (replicate 3 of 3).

Alpha-helical peptide YGG with GROMOS 54A7 in GROMOS (replicate 2 of 3).

Alpha-helical peptide YGG with GROMOS 54A7 in GROMOS (replicate 1 of 3).

Alpha-helical peptide YGA with GROMOS 54A7 in GROMOS (replicate 2 of 2).

Alpha-helical peptide YGA with GROMOS 54A7 in GROMOS (replicate 1 of 2).

Alpha-helical peptide YGA with GROMOS 54A7 in GROMOS (replicate 3 of 3).

Alpha-helical peptide YGA with GROMOS 54A7 in GROMOS (replicate 2 of 3).

Alpha-helical peptide YGA with GROMOS 54A7 in GROMOS (replicate 1 of 3).

Beta-hairpin peptide SES with GROMOS 54A7 in GROMOS (replicate 2 of 2).

Beta-hairpin peptide SES with GROMOS 54A7 in GROMOS (replicate 1 of 2).

Beta-hairpin peptide SES with GROMOS 54A7 in GROMOS (replicate 3 of 3).

Beta-hairpin peptide SES with GROMOS 54A7 in GROMOS (replicate 2 of 3).

Beta-hairpin peptide SES with GROMOS 54A7 in GROMOS (replicate 1 of 3).

Beta peptide 3 with GROMOS 54A7 in GROMOS (replicate 3 of 3).